Annotation of co-expression genes

PH01000963G0350's details annotation

1.Annotation

ICBR annotation: MLA7, putative

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01000963
Strand: +

RegionStartEnd
gene270531275339
mRNA270531275339
exon270531271639
exon272225273264
exon273709273890
exon274579275339
CDS271471271639
CDS272225273264
CDS273709273890
CDS274579274792

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.