Annotation of co-expression genes

PH01000966G0270's details annotation

1.Annotation

ICBR annotation: POLD3 - Putative DNA polymerase delta complex subunit, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01000966
Strand: -

RegionStartEnd
gene197778200224
mRNA197778200224
exon197778198639
exon199127199204
exon199402200224
CDS198528198639
CDS199127199204
CDS199402199577

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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