Annotation of co-expression genes

PH01000968G0330's details annotation

1.Annotation

ICBR annotation: expressed_protein

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01000968
Strand: +

RegionStartEnd
gene189812191251
mRNA189812191251
exon189812190225
exon190417190488
exon190591190658
exon190749191251
CDS190047190225
CDS190417190488
CDS190591190658
CDS190749190960

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.