PH01000973G0330's details annotation
1.Annotation
ICBR annotation: FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed
Blast result AT3G47930 : 3.40E-21
Blast annotation: L-galactono-1,4-lactone dehydrogenase
2.Location
Scaffold: PH01000973
Strand: -
| Region | Start | End |
| gene | 181755 | 185045 |
| mRNA | 181755 | 185045 |
| exon | 181755 | 185045 |
| CDS | 182401 | 183291 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000033 | galactonolactone_dehydrogenase_activity |
| coexpression network | CFinderM000820 | poly(ADP-ribose) glycohydrolase activity, galactonolactone_dehydrogenase_activity |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016633 | galactonolactone dehydrogenase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.