PH01000974G0440's details annotation
1.Annotation
ICBR annotation: clathrin adaptor complex small chain domain containing protein, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01000974
Strand: +
| Region | Start | End |
| gene | 277499 | 279203 |
| mRNA | 277499 | 279203 |
| exon | 277499 | 278263 |
| exon | 278702 | 278789 |
| exon | 278873 | 279203 |
| CDS | 277974 | 278263 |
| CDS | 278702 | 278789 |
| CDS | 278873 | 278932 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000972 | solute:hydrogen antiporter activity, GT31 GlycosylTransferases cation transport, rRNA methyltransferase activity, magnesium_ion_transport rRNA processing, transmembrane transport, magnesium_ion_transmembrane_transporter_activity galactosyltransferase activity, protein glycosylation, |
| coexpression network | CFinderM001084 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o), rRNA methyltransferase activity, rRNA processing, ATP synthesis coupled proton transport, hydrogen ion transmembrane transporter activity, serine-type peptidase activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.