PH01000978G0120's details annotation
1.Annotation
ICBR annotation: monodehydroascorbate reductase, putative, expressed
Blast result AT3G52880 : 4.00E-156
Blast annotation: monodehydroascorbate reductase 1
2.Location
Scaffold: PH01000978
Strand: +
| Region | Start | End |
| gene | 72655 | 78594 |
| mRNA | 72655 | 78594 |
| exon | 72655 | 72690 |
| exon | 72845 | 73096 |
| exon | 74435 | 74486 |
| exon | 74600 | 74680 |
| exon | 75171 | 75289 |
| exon | 75490 | 75706 |
| exon | 75912 | 76000 |
| exon | 76091 | 76216 |
| exon | 76486 | 76626 |
| exon | 77246 | 78594 |
| CDS | 72655 | 72690 |
| CDS | 72845 | 73096 |
| CDS | 74435 | 74486 |
| CDS | 74600 | 74680 |
| CDS | 75171 | 75289 |
| CDS | 75490 | 75706 |
| CDS | 75912 | 76000 |
| CDS | 76091 | 76216 |
| CDS | 76486 | 76626 |
| CDS | 77246 | 77569 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07992.13 | Pyr_redox_2 | 96 | 365 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.