PH01000983G0340's details annotation
1.Annotation
ICBR annotation: anaphase-promoting complex subunit 10, putative, expressed
Blast result AT2G18290 : 5.70E-35
Blast annotation: anaphase promoting complex 10
2.Location
Scaffold: PH01000983
Strand: -
| Region | Start | End |
| gene | 218426 | 221132 |
| mRNA | 218426 | 221132 |
| exon | 218426 | 218665 |
| exon | 218979 | 219071 |
| exon | 219162 | 219222 |
| exon | 219323 | 221132 |
| CDS | 218540 | 218665 |
| CDS | 218979 | 219071 |
| CDS | 219162 | 219222 |
| CDS | 219323 | 219528 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000059 | CSD Transcription_Regulator(from iTAK) Ubiquitin_mediated_proteolysis |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03256.15 | ANAPC10 | 16 | 122 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Ubiquitin mediated proteolysis | anaphase-promoting complex subunit 10 | ko04120 | K03357 |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.