PH01000984G0530's details annotation
1.Annotation
ICBR annotation: ATP-binding cassette sub-family E member 1, putative, expressed
Blast result AT4G19210 : 6.90E-66
Blast annotation: RNAse l inhibitor protein 2
2.Location
Scaffold: PH01000984
Strand: +
| Region | Start | End |
| gene | 361478 | 376684 |
| mRNA | 361478 | 376684 |
| exon | 361478 | 363882 |
| exon | 363983 | 364105 |
| exon | 375272 | 375387 |
| exon | 375484 | 375666 |
| exon | 375762 | 376031 |
| exon | 376339 | 376684 |
| CDS | 363804 | 363882 |
| CDS | 363983 | 364105 |
| CDS | 375272 | 375387 |
| CDS | 375484 | 375666 |
| CDS | 375762 | 376031 |
| CDS | 376339 | 376389 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00005.26 | ABC_tran | 142 | 255 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005524 | ATP binding |
| GO:0016887 | ATPase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.