Annotation of co-expression genes

PH01000986G0100's details annotation

1.Annotation

ICBR annotation: FKBP12-interacting protein of 37 kDa, putative, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01000986
Strand: -

RegionStartEnd
gene6448866949
mRNA6448866949
exon6448865124
exon6574565835
exon6589565962
exon6625366314
exon6643666949
CDS6502365124
CDS6574565835
CDS6589565962
CDS6625366314
CDS6643666532

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.