PH01000989G0470's details annotation
1.Annotation
ICBR annotation: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed
Blast result AT1G76550 : 0
Blast annotation: Phosphofructokinase family protein
2.Location
Scaffold: PH01000989
Strand: +
| Region | Start | End |
| gene | 350852 | 356959 |
| mRNA | 350852 | 356959 |
| exon | 350852 | 350979 |
| exon | 351059 | 351126 |
| exon | 351263 | 351346 |
| exon | 351803 | 351856 |
| exon | 352393 | 352473 |
| exon | 352592 | 352685 |
| exon | 352815 | 352888 |
| exon | 352959 | 353069 |
| exon | 353146 | 353190 |
| exon | 353281 | 353337 |
| exon | 353440 | 353544 |
| exon | 353619 | 353735 |
| exon | 353817 | 353920 |
| exon | 354109 | 354274 |
| exon | 354350 | 354427 |
| exon | 355874 | 356207 |
| exon | 356247 | 356959 |
| CDS | 350931 | 350979 |
| CDS | 351059 | 351126 |
| CDS | 351263 | 351346 |
| CDS | 351803 | 351856 |
| CDS | 352393 | 352473 |
| CDS | 352592 | 352685 |
| CDS | 352815 | 352888 |
| CDS | 352959 | 353069 |
| CDS | 353146 | 353190 |
| CDS | 353281 | 353337 |
| CDS | 353440 | 353544 |
| CDS | 353619 | 353735 |
| CDS | 353817 | 353920 |
| CDS | 354109 | 354274 |
| CDS | 354350 | 354427 |
| CDS | 355874 | 356207 |
| CDS | 356247 | 356932 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00365.19 | PFK | 3 | 282 |
| PF00800.17 | PDT | 558 | 733 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003872 | 6-phosphofructokinase activity |
| GO:0004664 | prephenate dehydratase activity |
| GO:0005945 | 6-phosphofructokinase complex |
| GO:0006096 | glycolysis |
| GO:0009094 | L-phenylalanine biosynthetic process |
| GO:0047334 | diphosphate-fructose-6-phosphate 1-phosphotransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.