PH01001006G0120's details annotation
1.Annotation
ICBR annotation: kinase, pfkB family, putative, expressed
Blast result AT1G17160 : 5.20E-21
Blast annotation: pfkB-like carbohydrate kinase family protein
2.Location
Scaffold: PH01001006
Strand: +
| Region | Start | End |
| gene | 60138 | 63956 |
| mRNA | 60138 | 63956 |
| exon | 60138 | 60364 |
| exon | 61342 | 61443 |
| exon | 61768 | 61789 |
| exon | 62064 | 63956 |
| CDS | 60306 | 60364 |
| CDS | 61342 | 61443 |
| CDS | 61768 | 61789 |
| CDS | 62064 | 62282 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.