PH01001009G0190's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT4G03180 : 3.80E-34
Blast annotation: -
2.Location
Scaffold: PH01001009
Strand: -
| Region | Start | End |
| gene | 133016 | 135964 |
| mRNA | 133016 | 135964 |
| exon | 133016 | 133683 |
| exon | 133873 | 133979 |
| exon | 135192 | 135964 |
| CDS | 133399 | 133683 |
| CDS | 133873 | 133979 |
| CDS | 135192 | 135366 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000874 |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08524.10 | rRNA_processing | 58 | 180 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.