PH01001017G0380's details annotation
1.Annotation
ICBR annotation: respiratory burst oxidase, putative, expressed
Blast result AT1G09090 : 3.40E-43
Blast annotation: respiratory burst oxidase homolog B
2.Location
Scaffold: PH01001017
Strand: +
| Region | Start | End |
| gene | 262877 | 265389 |
| mRNA | 262877 | 265389 |
| exon | 262877 | 262984 |
| exon | 263154 | 263386 |
| exon | 263473 | 265389 |
| CDS | 262941 | 262984 |
| CDS | 263154 | 263386 |
| CDS | 263473 | 263582 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08030.11 | NAD_binding_6 | 5 | 110 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.