PH01001020G0530's details annotation
1.Annotation
ICBR annotation: calmodulin binding protein, putative, expressed
Blast result AT5G57580 : 9.40E-48
Blast annotation: Calmodulin-binding protein
2.Location
Scaffold: PH01001020
Strand: +
| Region | Start | End |
| gene | 352358 | 358405 |
| mRNA | 352358 | 358405 |
| exon | 352358 | 354703 |
| exon | 356548 | 357029 |
| exon | 357116 | 357276 |
| exon | 357363 | 358405 |
| CDS | 354246 | 354703 |
| CDS | 356548 | 357029 |
| CDS | 357116 | 357276 |
| CDS | 357363 | 357572 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07887.10 | Calmodulin_bind | 166 | 433 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.