PH01001031G0350's details annotation
1.Annotation
ICBR annotation: OsPDIL1-2 protein disulfide isomerase PDIL1-2, expressed
Blast result AT1G21750 : 1.50E-97
Blast annotation: PDI-like 1-1
2.Location
Scaffold: PH01001031
Strand: -
| Region | Start | End |
| gene | 202474 | 206543 |
| mRNA | 202474 | 206543 |
| exon | 202474 | 203515 |
| exon | 204293 | 204410 |
| exon | 204816 | 204953 |
| exon | 205177 | 205302 |
| exon | 205533 | 205721 |
| exon | 205827 | 206114 |
| exon | 206219 | 206249 |
| exon | 206339 | 206543 |
| CDS | 203394 | 203515 |
| CDS | 204293 | 204410 |
| CDS | 204816 | 204953 |
| CDS | 205177 | 205302 |
| CDS | 205533 | 205721 |
| CDS | 205827 | 206114 |
| CDS | 206219 | 206249 |
| CDS | 206339 | 206517 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00085.19 | Thioredoxin | 34 | 140 |
| PF13848.5 | Thioredoxin_6 | 176 | 310 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006662 | glycerol ether metabolic process |
| GO:0009055 | electron carrier activity |
| GO:0015035 | protein disulfide oxidoreductase activity |
| GO:0016853 | isomerase activity |
| GO:0045454 | cell redox homeostasis |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.