PH01001035G0270's details annotation
1.Annotation
ICBR annotation: ZOS9-03 - C2H2 zinc finger protein, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01001035
Strand: -
| Region | Start | End |
| gene | 225909 | 233163 |
| mRNA | 225909 | 233163 |
| exon | 225909 | 226442 |
| exon | 226942 | 227066 |
| exon | 227220 | 227279 |
| exon | 227977 | 228113 |
| exon | 229595 | 229721 |
| exon | 229751 | 233163 |
| CDS | 226331 | 226442 |
| CDS | 226942 | 227066 |
| CDS | 227220 | 227279 |
| CDS | 227977 | 228113 |
| CDS | 229595 | 229721 |
| CDS | 229751 | 229819 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000780 | Lysine_degradation Glycosylphosphatidylinositol(GPI)-anchor_biosynthesis SET Transcription_Regulator(from iTAK) endoplasmic reticulum membrane, GPI anchor biosynthetic process, protein refolding, |
| coexpression network | CFinderM001714 | phosphatidylinositol_dephosphorylation Ribosome_biogenesis_in_eukaryotes RNA processing, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.