PH01001035G0360's details annotation
1.Annotation
ICBR annotation: galactosyltransferase family protein, putative, expressed
Blast result AT1G74800 : 4.00E-44
Blast annotation: Galactosyltransferase family protein
2.Location
Scaffold: PH01001035
Strand: +
| Region | Start | End |
| gene | 270447 | 277099 |
| mRNA | 270447 | 277099 |
| exon | 270447 | 271989 |
| exon | 273195 | 273342 |
| exon | 273426 | 273554 |
| exon | 273638 | 273742 |
| exon | 274790 | 274863 |
| exon | 275569 | 275591 |
| exon | 275722 | 275774 |
| exon | 276229 | 276293 |
| exon | 276520 | 277099 |
| CDS | 271832 | 271989 |
| CDS | 273195 | 273342 |
| CDS | 273426 | 273554 |
| CDS | 273638 | 273742 |
| CDS | 274790 | 274863 |
| CDS | 275569 | 275591 |
| CDS | 275722 | 275774 |
| CDS | 276229 | 276293 |
| CDS | 276520 | 276685 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01762.20 | Galactosyl_T | 76 | 193 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.