Annotation of co-expression genes

PH01001050G0100's details annotation

1.Annotation

ICBR annotation: cis-zeatin O-glucosyltransferase, putative, expressed

Blast result AT2G15490 : 4.90E-42
Blast annotation: UDP-glycosyltransferase 73B4

2.Location

Scaffold: PH01001050
Strand: -

RegionStartEnd
gene7035772060
mRNA7035772060
exon7035772060
CDS7042371826

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist 		Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist 		Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networkCFinderM000084cell wall macromolecule catabolic process,
chitin catabolic process,
WRKY Transcription_Regulator(from PlantTFDB)
defense response to fungus,
ammonium_transport
ammonium_transmembrane_transport
defense response to bacterium,
metabolic process,
chitinase activity,
coexpression networkCFinderM000632Zeatin_biosynthesis
NAC Transcription_Regulator(from PlantTFDB)
WRKY Transcription_Regulator(from PlantTFDB)

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
PF00201.17UDPGT265391

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
Zeatin biosynthesiscis-zeatin O-glucosyltransferase [EC:2.4.1.215]ko00908K13495

10.Gene Ontology

GO AccessionGO Annotation
GO:0008152metabolic process
GO:0016758transferase activity, transferring hexosyl groups

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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