PH01001055G0530's details annotation
1.Annotation
ICBR annotation: serine/threonine-protein kinase 16, putative, expressed
Blast result AT5G08160 : 7.00E-156
Blast annotation: serine/threonine protein kinase 3
2.Location
Scaffold: PH01001055
Strand: +
| Region | Start | End |
| gene | 323852 | 327687 |
| mRNA | 323852 | 327687 |
| exon | 323852 | 324133 |
| exon | 324537 | 324679 |
| exon | 325024 | 325164 |
| exon | 325891 | 326076 |
| exon | 326441 | 326565 |
| exon | 326981 | 327687 |
| CDS | 323941 | 324133 |
| CDS | 324537 | 324679 |
| CDS | 325024 | 325164 |
| CDS | 325891 | 326076 |
| CDS | 326441 | 326565 |
| CDS | 326981 | 327206 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00069.24 | Pkinase | 29 | 327 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.