PH01001057G0590's details annotation
1.Annotation
ICBR annotation: transporter, putative, expressed
Blast result AT3G11320 : 7.30E-98
Blast annotation: Nucleotide-sugar transporter family protein
2.Location
Scaffold: PH01001057
Strand: -
| Region | Start | End |
| gene | 402567 | 405178 |
| mRNA | 402567 | 405178 |
| exon | 402567 | 403037 |
| exon | 403175 | 403403 |
| exon | 403483 | 403586 |
| exon | 403748 | 405178 |
| CDS | 402891 | 403037 |
| CDS | 403175 | 403403 |
| CDS | 403483 | 403586 |
| CDS | 403748 | 404059 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03151.15 | TPT | 29 | 255 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.