PH01001065G0220's details annotation
1.Annotation
ICBR annotation: tubulin, putative, expressed
Blast result AT4G37190 : 4.00E-133
Blast annotation: -
2.Location
Scaffold: PH01001065
Strand: -
| Region | Start | End |
| gene | 120460 | 126331 |
| mRNA | 120460 | 126331 |
| exon | 120460 | 121452 |
| exon | 121633 | 121752 |
| exon | 121836 | 122078 |
| exon | 122532 | 122781 |
| exon | 122944 | 123295 |
| exon | 123983 | 124038 |
| exon | 124332 | 124433 |
| exon | 125293 | 126331 |
| CDS | 121004 | 121452 |
| CDS | 121633 | 121752 |
| CDS | 121836 | 122078 |
| CDS | 122532 | 122781 |
| CDS | 122944 | 123295 |
| CDS | 123983 | 124038 |
| CDS | 124332 | 124433 |
| CDS | 125293 | 125436 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF14881.5 | Tubulin_3 | 153 | 335 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0043234 | protein complex |
| GO:0051258 | protein polymerization |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.