PH01001066G0300's details annotation
1.Annotation
ICBR annotation: eukaryotic translation initiation factor 4B, putative, expressed
Blast result AT3G26400 : 1.50E-40
Blast annotation: eukaryotic translation initiation factor 4B1
2.Location
Scaffold: PH01001066
Strand: +
| Region | Start | End |
| gene | 245804 | 251995 |
| mRNA | 245804 | 251995 |
| exon | 245804 | 247055 |
| exon | 247157 | 247567 |
| exon | 249901 | 250281 |
| exon | 250493 | 250516 |
| exon | 250715 | 251995 |
| CDS | 246802 | 247055 |
| CDS | 247157 | 247567 |
| CDS | 249901 | 250281 |
| CDS | 250493 | 250516 |
| CDS | 250715 | 250739 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06273.10 | eIF-4B | 1 | 85 |
| PF06273.10 | eIF-4B | 86 | 196 |
| PF06273.10 | eIF-4B | 216 | 339 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.