PH01001074G0520's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G46200 : 5.10E-62
Blast annotation: -
2.Location
Scaffold: PH01001074
Strand: -
| Region | Start | End |
| gene | 350964 | 358415 |
| mRNA | 350964 | 358415 |
| exon | 350964 | 351373 |
| exon | 351576 | 351871 |
| exon | 353310 | 353356 |
| exon | 353407 | 353494 |
| exon | 354072 | 354112 |
| exon | 354419 | 354804 |
| exon | 355791 | 355920 |
| exon | 356456 | 356521 |
| exon | 356628 | 356711 |
| exon | 357034 | 357409 |
| exon | 357499 | 357560 |
| exon | 357841 | 358415 |
| CDS | 351048 | 351373 |
| CDS | 351576 | 351871 |
| CDS | 353310 | 353356 |
| CDS | 353407 | 353494 |
| CDS | 354072 | 354112 |
| CDS | 354419 | 354804 |
| CDS | 355791 | 355920 |
| CDS | 356456 | 356521 |
| CDS | 356628 | 356711 |
| CDS | 357034 | 357409 |
| CDS | 357499 | 357560 |
| CDS | 357841 | 358227 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.