PH01001083G0380's details annotation
1.Annotation
ICBR annotation: hydrolase, alpha/beta fold family protein, putative, expressed
Blast result AT3G10840 : 1.60E-55
Blast annotation: alpha/beta-Hydrolases superfamily protein
2.Location
Scaffold: PH01001083
Strand: -
| Region | Start | End |
| gene | 250640 | 253821 |
| mRNA | 250640 | 253821 |
| exon | 250640 | 251117 |
| exon | 251303 | 251423 |
| exon | 251509 | 251607 |
| exon | 252291 | 252521 |
| exon | 252665 | 253821 |
| CDS | 250897 | 251117 |
| CDS | 251303 | 251423 |
| CDS | 251509 | 251607 |
| CDS | 252291 | 252521 |
| CDS | 252665 | 252745 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016812 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.