PH01001089G0020's details annotation
1.Annotation
ICBR annotation: helix-loop-helix DNA-binding protein, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01001089
Strand: +
| Region | Start | End |
| gene | 5701 | 9938 |
| mRNA | 5701 | 9938 |
| exon | 5701 | 6451 |
| exon | 7117 | 7502 |
| exon | 8661 | 8742 |
| exon | 8853 | 9022 |
| exon | 9164 | 9325 |
| exon | 9710 | 9938 |
| CDS | 6049 | 6451 |
| CDS | 7117 | 7502 |
| CDS | 8661 | 8742 |
| CDS | 8853 | 9022 |
| CDS | 9164 | 9325 |
| CDS | 9710 | 9895 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0008152 | metabolic process |
| GO:0016740 | transferase activity |
| GO:0030170 | pyridoxal phosphate binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.