PH01001109G0450's details annotation
1.Annotation
ICBR annotation: SLT1 protein, putative, expressed
Blast result AT2G37570 : 4.00E-157
Blast annotation: HSP20-like chaperones superfamily protein
2.Location
Scaffold: PH01001109
Strand: -
| Region | Start | End |
| gene | 282763 | 285284 |
| mRNA | 282763 | 285284 |
| exon | 282763 | 285284 |
| CDS | 282903 | 284513 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001174 | arsenite transmembrane transporter activity, arsenite_transport DNA photolyase activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.