PH01001117G0090's details annotation
1.Annotation
ICBR annotation: protein kinase domain containing protein, expressed
Blast result AT2G28930 : 1.00E-113
Blast annotation: protein kinase 1B
2.Location
Scaffold: PH01001117
Strand: -
| Region | Start | End |
| gene | 61998 | 66335 |
| mRNA | 61998 | 66335 |
| exon | 61998 | 63401 |
| exon | 64128 | 64251 |
| exon | 64334 | 64476 |
| exon | 64585 | 64720 |
| exon | 64814 | 65139 |
| exon | 65735 | 66335 |
| CDS | 62944 | 63401 |
| CDS | 64128 | 64251 |
| CDS | 64334 | 64476 |
| CDS | 64585 | 64720 |
| CDS | 64814 | 65139 |
| CDS | 65735 | 65798 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00069.24 | Pkinase | 3 | 248 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.