PH01001125G0390's details annotation
1.Annotation
ICBR annotation: DNA binding protein, putative, expressed
Blast result AT5G11730 : 3.00E-133
Blast annotation: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
2.Location
Scaffold: PH01001125
Strand: +
| Region | Start | End |
| gene | 250197 | 255968 |
| mRNA | 250197 | 255968 |
| exon | 250197 | 251073 |
| exon | 252167 | 252777 |
| exon | 252962 | 253033 |
| exon | 253642 | 253693 |
| exon | 254625 | 255968 |
| CDS | 250534 | 251073 |
| CDS | 252167 | 252777 |
| CDS | 252962 | 253033 |
| CDS | 253642 | 253693 |
| CDS | 254625 | 254750 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| GlycosylTransferases | GTnc |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02485.20 | Branch | 125 | 351 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008375 | acetylglucosaminyltransferase activity |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.