PH01001127G0020's details annotation
1.Annotation
ICBR annotation: annexin, putative, expressed
Blast result AT5G12380 : 2.70E-35
Blast annotation: annexin 8
2.Location
Scaffold: PH01001127
Strand: +
| Region | Start | End |
| gene | 10436 | 12985 |
| mRNA | 10436 | 12985 |
| exon | 10436 | 11066 |
| exon | 11137 | 11361 |
| exon | 11495 | 11713 |
| exon | 11807 | 11896 |
| exon | 11974 | 12985 |
| CDS | 10857 | 11066 |
| CDS | 11137 | 11361 |
| CDS | 11495 | 11713 |
| CDS | 11807 | 11896 |
| CDS | 11974 | 12186 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00191.19 | Annexin | 92 | 150 |
| PF00191.19 | Annexin | 169 | 233 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005509 | calcium ion binding |
| GO:0005544 | calcium-dependent phospholipid binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.