PH01001136G0480's details annotation
1.Annotation
ICBR annotation: hexokinase, putative, expressed
Blast result AT4G29130 : 9.50E-67
Blast annotation: hexokinase 1
2.Location
Scaffold: PH01001136
Strand: +
| Region | Start | End |
| gene | 379617 | 383131 |
| mRNA | 379617 | 383131 |
| exon | 379617 | 380139 |
| exon | 381128 | 381278 |
| exon | 381376 | 381433 |
| exon | 381499 | 381545 |
| exon | 381696 | 381770 |
| exon | 381868 | 381940 |
| exon | 382297 | 383131 |
| CDS | 379955 | 380139 |
| CDS | 381128 | 381278 |
| CDS | 381376 | 381433 |
| CDS | 381499 | 381545 |
| CDS | 381696 | 381770 |
| CDS | 381868 | 381940 |
| CDS | 382297 | 382817 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00349.20 | Hexokinase_1 | 18 | 132 |
| PF00349.20 | Hexokinase_1 | 139 | 185 |
| PF03727.15 | Hexokinase_2 | 197 | 316 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005524 | ATP binding |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.