Gene details

Annotation of co-expression genes

PH01001136G0490's details annotation

1.Annotation

ICBR annotation: peptidase, T1 family, putative, expressed

Blast result AT5G40580 : 2.00E-130
Blast annotation: 20S proteasome beta subunit PBB2

2.Location

Scaffold: PH01001136
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	null	null

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF00227.25	Proteasome	85	265

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Proteasome	20S proteasome subunit beta 2 [EC:3.4.25.1]	ko03051	K02739

10.Gene Ontology

GO Accession	GO Annotation
GO:0004175	endopeptidase activity
GO:0004298	threonine-type endopeptidase activity
GO:0005839	proteasome core complex
GO:0051603	proteolysis involved in cellular protein catabolic process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.