PH01001137G0180's details annotation
1.Annotation
ICBR annotation: PWWP domain containing protein, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01001137
Strand: +
| Region | Start | End |
| gene | 108137 | 113828 |
| mRNA | 108137 | 113828 |
| exon | 108137 | 108328 |
| exon | 108370 | 108450 |
| exon | 108547 | 108630 |
| exon | 109356 | 109399 |
| exon | 110038 | 110200 |
| exon | 110985 | 111041 |
| exon | 111126 | 111183 |
| exon | 111560 | 111831 |
| exon | 112340 | 112498 |
| exon | 112918 | 112943 |
| exon | 113062 | 113248 |
| exon | 113514 | 113828 |
| CDS | 108317 | 108328 |
| CDS | 108370 | 108450 |
| CDS | 108547 | 108630 |
| CDS | 109356 | 109399 |
| CDS | 110038 | 110200 |
| CDS | 110985 | 111041 |
| CDS | 111126 | 111183 |
| CDS | 111560 | 111831 |
| CDS | 112340 | 112498 |
| CDS | 112918 | 112943 |
| CDS | 113062 | 113248 |
| CDS | 113514 | 113678 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.