PH01001157G0270's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G03670 : 2.70E-30
Blast annotation: ankyrin repeat family protein
2.Location
Scaffold: PH01001157
Strand: -
| Region | Start | End |
| gene | 217278 | 220619 |
| mRNA | 217278 | 220619 |
| exon | 217278 | 217985 |
| exon | 218409 | 218468 |
| exon | 219000 | 219529 |
| exon | 219690 | 220619 |
| CDS | 217932 | 217985 |
| CDS | 218409 | 218468 |
| CDS | 219000 | 219529 |
| CDS | 219690 | 220251 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12796.6 | Ank_2 | 147 | 233 |
| PF12796.6 | Ank_2 | 249 | 340 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.