Annotation of co-expression genes

PH01001169G0610's details annotation

1.Annotation

ICBR annotation: flavonol-3-O-glycoside-7-O-glucosyltransferase 1, putative, expressed

Blast result AT3G53150 : 5.90E-68
Blast annotation: UDP-glucosyl transferase 73D1

2.Location

Scaffold: PH01001169
Strand: +

RegionStartEnd
gene388725391565
mRNA388725391565
exon388725389255
exon390237390822
exon391097391565
CDS388840389255
CDS390237390822
CDS391097391114

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
GO:0008152metabolic process
GO:0016758transferase activity, transferring hexosyl groups

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.