PH01001170G0190's details annotation
1.Annotation
ICBR annotation: craniofacial development protein 1, putative, expressed
Blast result AT5G30490 : 1.90E-41
Blast annotation: -
2.Location
Scaffold: PH01001170
Strand: -
| Region | Start | End |
| gene | 132124 | 137539 |
| mRNA | 132124 | 137539 |
| exon | 132124 | 133448 |
| exon | 133604 | 133783 |
| exon | 134480 | 134520 |
| exon | 135255 | 135335 |
| exon | 135692 | 137539 |
| CDS | 132885 | 133448 |
| CDS | 133604 | 133783 |
| CDS | 134480 | 134520 |
| CDS | 135255 | 135335 |
| CDS | 135692 | 135821 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07572.11 | BCNT | 243 | 315 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.