PH01001174G0210's details annotation
1.Annotation
ICBR annotation: hydrolase, alpha/beta fold family domain containing protein, expressed
Blast result AT3G61540 : 0.00E+00
Blast annotation: alpha/beta-Hydrolases superfamily protein
2.Location
Scaffold: PH01001174
Strand: +
| Region | Start | End |
| gene | 125931 | 132730 |
| mRNA | 125931 | 132730 |
| exon | 125931 | 126548 |
| exon | 127190 | 127326 |
| exon | 127416 | 127589 |
| exon | 129252 | 129488 |
| exon | 129575 | 129675 |
| exon | 129769 | 129841 |
| exon | 129964 | 130032 |
| exon | 130117 | 130224 |
| exon | 130685 | 130810 |
| exon | 132239 | 132730 |
| CDS | 126260 | 126548 |
| CDS | 127190 | 127326 |
| CDS | 127416 | 127589 |
| CDS | 129252 | 129488 |
| CDS | 129575 | 129675 |
| CDS | 129769 | 129841 |
| CDS | 129964 | 130032 |
| CDS | 130117 | 130224 |
| CDS | 130685 | 130810 |
| CDS | 132239 | 132433 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00561.19 | Abhydrolase_1 | 106 | 254 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006508 | proteolysis |
| GO:0008233 | peptidase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.