PH01001184G0290's details annotation
1.Annotation
ICBR annotation: ethylene-insensitive 3, putative, expressed
Blast result AT3G20770 : 1.00E-127
Blast annotation: Ethylene insensitive 3 family protein
2.Location
Scaffold: PH01001184
Strand: -
| Region | Start | End |
| gene | 200098 | 205272 |
| mRNA | 200098 | 205272 |
| exon | 200098 | 200655 |
| exon | 200710 | 200840 |
| exon | 200903 | 201010 |
| exon | 202401 | 205272 |
| CDS | 200465 | 200655 |
| CDS | 200710 | 200840 |
| CDS | 200903 | 201010 |
| CDS | 202401 | 204172 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Transcription_Regulator(from iTAK) | EIL |
| Transcription_Regulator(from PlantTFDB) | EIL |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04873.12 | EIN3 | 64 | 320 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Plant hormone signal transduction | ethylene-insensitive protein 3 | ko04075 | K14514 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003700 | sequence-specific DNA binding transcription factor activity |
| GO:0005634 | nucleus |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.