PH01001186G0460's details annotation
1.Annotation
ICBR annotation: PHLOEM 2-LIKE A5, putative, expressed
Blast result AT4G19840 : 2.20E-37
Blast annotation: phloem protein 2-A1
2.Location
Scaffold: PH01001186
Strand: +
| Region | Start | End |
| gene | 275029 | 277156 |
| mRNA | 275029 | 277156 |
| exon | 275029 | 275349 |
| exon | 275455 | 275570 |
| exon | 276074 | 277156 |
| CDS | 275176 | 275349 |
| CDS | 275455 | 275570 |
| CDS | 276074 | 276449 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000309 | malate_transport nucleoside transmembrane transporter activity, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF14299.5 | PP2 | 68 | 219 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.