Annotation of co-expression genes

PH01001190G0330's details annotation

1.Annotation

ICBR annotation: hypothetical_protein

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01001190
Strand: +

RegionStartEnd
gene294263301063
mRNA294263301063
exon294263295246
exon295475295800
exon297727297981
exon298260301063
CDS295123295246
CDS295475295800
CDS297727297981
CDS298260298595

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
nullnull

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.