PH01001208G0460's details annotation
1.Annotation
ICBR annotation: X8 domain containing protein, expressed
Blast result AT1G29380 : 2.60E-31
Blast annotation: Carbohydrate-binding X8 domain superfamily protein
2.Location
Scaffold: PH01001208
Strand: -
| Region | Start | End |
| gene | 350545 | 352861 |
| mRNA | 350545 | 352861 |
| exon | 350545 | 351355 |
| exon | 351446 | 351476 |
| exon | 351608 | 352084 |
| exon | 352384 | 352861 |
| CDS | 351073 | 351355 |
| CDS | 351446 | 351476 |
| CDS | 351608 | 352084 |
| CDS | 352384 | 352447 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Carbohydrate-Binding_Modules | CBM43 |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07983.12 | X8 | 104 | 174 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.