PH01001232G0500's details annotation
1.Annotation
ICBR annotation: Ser/Thr protein phosphatase family protein, putative, expressed
Blast result AT3G47810 : 7.20E-72
Blast annotation: Calcineurin-like metallo-phosphoesterase superfamily protein
2.Location
Scaffold: PH01001232
Strand: +
| Region | Start | End |
| gene | 347664 | 354635 |
| mRNA | 347664 | 354635 |
| exon | 347664 | 349422 |
| exon | 350694 | 350831 |
| exon | 353053 | 354635 |
| CDS | 349306 | 349422 |
| CDS | 350694 | 350831 |
| CDS | 353053 | 353349 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000241 | signal peptidase complex, Protein_export signal peptide processing, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF12850.6 | Metallophos_2 | 24 | 152 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016788 | hydrolase activity, acting on ester bonds |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.