PH01001240G0380's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G35140 : 2.00E-33
Blast annotation: DCD (Development and Cell Death) domain protein
2.Location
Scaffold: PH01001240
Strand: +
| Region | Start | End |
| gene | 251183 | 259196 |
| mRNA | 251183 | 259196 |
| exon | 251183 | 254126 |
| exon | 254231 | 254347 |
| exon | 254420 | 257431 |
| exon | 257814 | 257849 |
| exon | 258236 | 258325 |
| exon | 258610 | 259196 |
| CDS | 253851 | 254126 |
| CDS | 254231 | 254347 |
| CDS | 254420 | 257431 |
| CDS | 257814 | 257849 |
| CDS | 258236 | 258325 |
| CDS | 258610 | 258894 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10539.8 | Dev_Cell_Death | 15 | 139 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.