PH01001244G0130's details annotation
1.Annotation
ICBR annotation: 5-oxoprolinase, putative, expressed
Blast result AT5G37830 : 1.00E-77
Blast annotation: oxoprolinase 1
2.Location
Scaffold: PH01001244
Strand: +
| Region | Start | End |
| gene | 107362 | 109903 |
| mRNA | 107362 | 109903 |
| exon | 107362 | 108616 |
| exon | 108730 | 109007 |
| exon | 109075 | 109231 |
| exon | 109326 | 109380 |
| exon | 109703 | 109903 |
| CDS | 108320 | 108616 |
| CDS | 108730 | 109007 |
| CDS | 109075 | 109231 |
| CDS | 109326 | 109380 |
| CDS | 109703 | 109890 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05378.12 | Hydant_A_N | 9 | 102 |
| PF05378.12 | Hydant_A_N | 107 | 157 |
| PF01968.17 | Hydantoinase_A | 262 | 301 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016787 | hydrolase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.