PH01001258G0110's details annotation
1.Annotation
ICBR annotation: dihydroorotate dihydrogenase protein, putative, expressed
Blast result AT3G17810 : 5.10E-90
Blast annotation: pyrimidine 1
2.Location
Scaffold: PH01001258
Strand: -
| Region | Start | End |
| gene | 73766 | 76335 |
| mRNA | 73766 | 76335 |
| exon | 73766 | 75137 |
| exon | 75612 | 76335 |
| CDS | 74414 | 75137 |
| CDS | 75612 | 76126 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01694.21 | Rhomboid | 57 | 167 |
| PF01180.20 | DHO_dh | 198 | 380 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003824 | catalytic activity |
| GO:0004152 | dihydroorotate dehydrogenase activity |
| GO:0004252 | serine-type endopeptidase activity |
| GO:0006222 | UMP biosynthetic process |
| GO:0016021 | integral to membrane |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.