PH01001260G0450's details annotation
1.Annotation
ICBR annotation: PLA IIIA/PLP7, putative, expressed
Blast result AT3G54950 : 3.60E-35
Blast annotation: patatin-like protein 6
2.Location
Scaffold: PH01001260
Strand: -
| Region | Start | End |
| gene | 333219 | 335148 |
| mRNA | 333219 | 335148 |
| exon | 333219 | 333292 |
| exon | 333477 | 333811 |
| exon | 333939 | 334001 |
| exon | 334100 | 334330 |
| exon | 334502 | 335148 |
| CDS | 333256 | 333292 |
| CDS | 333477 | 333811 |
| CDS | 333939 | 334001 |
| CDS | 334100 | 334330 |
| CDS | 334502 | 335017 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008152 | metabolic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.