PH01001266G0180's details annotation
1.Annotation
ICBR annotation: dynamin-2B, putative, expressed
Blast result AT1G59610 : 0
Blast annotation: dynamin-like 3
2.Location
Scaffold: PH01001266
Strand: -
| Region | Start | End |
| gene | 105249 | 117796 |
| mRNA | 105249 | 117796 |
| exon | 105249 | 106101 |
| exon | 106605 | 106777 |
| exon | 107525 | 107572 |
| exon | 108104 | 108217 |
| exon | 108252 | 108364 |
| exon | 108590 | 108780 |
| exon | 108864 | 109011 |
| exon | 109464 | 109540 |
| exon | 109691 | 109766 |
| exon | 109945 | 110020 |
| exon | 111324 | 111451 |
| exon | 111552 | 111635 |
| exon | 112118 | 112171 |
| exon | 112312 | 112431 |
| exon | 112525 | 112626 |
| exon | 114285 | 114432 |
| exon | 114530 | 114869 |
| exon | 115092 | 115209 |
| exon | 116095 | 116156 |
| exon | 116829 | 117024 |
| exon | 117240 | 117796 |
| CDS | 105707 | 106101 |
| CDS | 106605 | 106777 |
| CDS | 107525 | 107572 |
| CDS | 108104 | 108217 |
| CDS | 108252 | 108364 |
| CDS | 108590 | 108780 |
| CDS | 108864 | 109011 |
| CDS | 109464 | 109540 |
| CDS | 109691 | 109766 |
| CDS | 109945 | 110020 |
| CDS | 111324 | 111451 |
| CDS | 111552 | 111635 |
| CDS | 112118 | 112171 |
| CDS | 112312 | 112431 |
| CDS | 112525 | 112626 |
| CDS | 114285 | 114432 |
| CDS | 114530 | 114869 |
| CDS | 115092 | 115209 |
| CDS | 116095 | 116156 |
| CDS | 116829 | 117024 |
| CDS | 117240 | 117386 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00350.22 | Dynamin_N | 115 | 185 |
| PF01031.19 | Dynamin_M | 258 | 492 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Endocytosis | dynamin GTPase [EC:3.6.5.5] | ko04144 | K01528 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003924 | GTPase activity |
| GO:0005515 | protein binding |
| GO:0005525 | GTP binding |
| GO:0005543 | phospholipid binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.