Gene details

Annotation of co-expression genes

PH01001286G0020's details annotation

1.Annotation

ICBR annotation: STE_MEKK_ste11_MAP3K.21 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed

Blast result AT3G06030 : 1.90E-73
Blast annotation: NPK1-related protein kinase 3

2.Location

Scaffold: PH01001286
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM001001	MCM_complex proteasomal ubiquitin-dependent protein catabolic process, DNA-dependent DNA replication initiation, nucleotide-excision repair, nucleus, STE_STE11 (from iTAK) GTnc GlycosylTransferases Nucleotide_excision_repair DNA_replication
coexpression network	CFinderM001002	Phenylalanine,_tyrosine_and_tryptophan_biosynthesis aromatic amino acid family biosynthetic process, cytokinesis microtubule cytoskeleton organization, 3-dehydroquinate synthase activity,
coexpression network	CFinderM001003	Endocytosis STE_STE11 (from iTAK)

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0004672	protein kinase activity
GO:0005524	ATP binding
GO:0006468	protein phosphorylation
GO:0016772	transferase activity, transferring phosphorus-containing groups

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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