PH01001343G0160's details annotation
1.Annotation
ICBR annotation: Sad1 / UNC-like C-terminal domain containing protein, putative, expressed
Blast result AT1G22882 : 5.00E-106
Blast annotation: Galactose-binding protein
2.Location
Scaffold: PH01001343
Strand: +
| Region | Start | End |
| gene | 114171 | 119075 |
| mRNA | 114171 | 119075 |
| exon | 114171 | 115030 |
| exon | 115359 | 116692 |
| exon | 116777 | 116862 |
| exon | 117117 | 117229 |
| exon | 118634 | 119075 |
| CDS | 114856 | 115030 |
| CDS | 115359 | 116692 |
| CDS | 116777 | 116862 |
| CDS | 117117 | 117229 |
| CDS | 118634 | 118842 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07738.12 | Sad1_UNC | 230 | 352 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.