PH01001350G0010's details annotation
1.Annotation
ICBR annotation: CAMK_KIN1/SNF1/Nim1_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01001350
Strand: -
| Region | Start | End |
| gene | 3275 | 7025 |
| mRNA | 3275 | 7025 |
| exon | 3275 | 3804 |
| exon | 5001 | 5294 |
| exon | 5649 | 6020 |
| exon | 6390 | 6496 |
| exon | 6611 | 7025 |
| CDS | 3580 | 3804 |
| CDS | 5001 | 5294 |
| CDS | 5649 | 6020 |
| CDS | 6390 | 6496 |
| CDS | 6611 | 6797 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000042 | exocyst, Galactose_metabolism lipid biosynthetic process, exocytosis, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.