PH01001376G0360's details annotation
1.Annotation
ICBR annotation: IscA-like iron-sulfur assembly protein, mitochondrial precursor, putative, expressed
Blast result AT2G16710 : 3.10E-55
Blast annotation: Iron-sulphur cluster biosynthesis family protein
2.Location
Scaffold: PH01001376
Strand: -
| Region | Start | End |
| gene | 244816 | 247159 |
| mRNA | 244816 | 247159 |
| exon | 244816 | 245686 |
| exon | 245757 | 245874 |
| exon | 246779 | 247159 |
| CDS | 245596 | 245686 |
| CDS | 245757 | 245874 |
| CDS | 246779 | 246968 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01521.19 | Fe-S_biosyn | 22 | 121 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005198 | structural molecule activity |
| GO:0016226 | iron-sulfur cluster assembly |
| GO:0051536 | iron-sulfur cluster binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.